Stem-loop stu-MIR5303c

Accession

MI0025764

Description

Solanum tuberosum stu-MIR5303c precursor miRNA

Literature search

3 open access papers mention stu-MIR5303c
(6 sentences)

Sequence

1698 reads, 54.0 reads per million, 79 experiments

acccgugucggguucuccAAAAAUACACUACUUUUGGAGAAUCCGACACGCACCC
...(((((((((((((((((((.........))))))))))))))))))).....

Structure

--acc                   AUA 
     cgugucggguucuccAAAA   C
     |||||||||||||||||||   A
     GCACAGCCUAAGAGGUUUU   C
CCCAC                   CAU 

Annotation confidence Low

Genome context

JH137893.1: 976272-976326 [+]

Mature stu-miR5303c-5p

• Accession: MIMAT0058185
• Description: Solanum tuberosum stu-miR5303c-5p mature miRNA
• Sequence: 19 - AAAAAUACACUACUUUUG - 36
• Evidence: experimental ; unknown

Mature stu-miR5303c-3p

• Accession: MIMAT0030855
• Description: Solanum tuberosum stu-miR5303c-3p mature miRNA
• Sequence: 32 - UUUUGGAGAAUCCGACACGCACCC - 55
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233