Stem-loop stu-MIR7989

Accession

MI0025772

Description

Solanum tuberosum stu-MIR7989 precursor miRNA

Sequence

uucaguuaauggucuauuaugucucgugauauuaguaauuuugaucauaucauuuauaaaugaauuagucaaauauauaauaugaucaaaaugacucguauuaguuagACAAAUAAGUCCAUUACCUGAACC
(((((.((((((.(((((.(((((..((((((.(((.(((((((((((((....((((..(((.....)))..))))..))))))))))))).))).))))))...)))))))).)).)))))).)))))..

Structure

--     u      u  -   a     -cg      u   a             cauu    aa   a 
  uucag uaaugg cu auu ugucu   ugauau agu auuuugaucauau    uaua  uga u
  ||||| |||||| || ||| |||||   |||||| ||| |||||||||||||    ||||  ||| u
  AAGUC AUUACC GA UAA ACAga   auuaug uca uaaaacuaguaua    auau  acu a
CC     C      U  A   -     uug      c   g             --au    aa   g 

Annotation confidence Not enough data

Genome context

JH137816.1: 1118598-1118729 [+]

Mature stu-miR7989

• Accession: MIMAT0030863
• Description: Solanum tuberosum stu-miR7989 mature miRNA
• Sequence: 109 - ACAAAUAAGUCCAUUACCUGAACC - 132
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233