Stem-loop stu-MIR7990a

Accession

MI0025773

Description

Solanum tuberosum stu-MIR7990a precursor miRNA

Sequence

481 reads, 16.0 reads per million, 66 experiments

gccaaagUUAUGACCAUUUGAAGUUacauaaauauacaacuacuuuuuuuguguuucaaucuuuaauaugcugaaacUUCAAAUGAUCGUAACUUUGGCCU
(((((((((((((.((((((((((((((((((...............)))))))....................))))))))))).)))))))))))))..

Structure

--             C           --------------------       uauaca 
  gccaaagUUAUGA CAUUUGAAGUU                    acauaaa      a
  ||||||||||||| |||||||||||                    |||||||      c
  CGGUUUCAAUGCU GUAAACUUcaa                    uguguuu      u
UC             A           agucguauaauuucuaacuu       uuuuca 

Annotation confidence Low

Genome context

JH137794.1: 4455048-4455148 [-]

Mature stu-miR7990a-5p

• Accession: MIMAT0058189
• Description: Solanum tuberosum stu-miR7990a-5p mature miRNA
• Sequence: 8 - UUAUGACCAUUUGAAGUU - 25
• Evidence: experimental ; unknown

Mature stu-miR7990a-3p

• Accession: MIMAT0030864
• Description: Solanum tuberosum stu-miR7990a-3p mature miRNA
• Sequence: 78 - UUCAAAUGAUCGUAACUUUGGCCU - 101
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233