miRBase entry: stu-MIR7991b

Stem-loop stu-MIR7991b


Accession
MI0025775
Description
Solanum tuberosum stu-MIR7991b precursor miRNA


Sequence

1685 reads, 52.0 reads per million, 69 experiments
AGGAGGUCGGAAUUUUUAAUGAAUuacAAUAAAAACCGACCUCUUGA
((((((((((..((((((.((.....)).))))))))))))))))..

Structure
--          AA      A  A 
  AGGAGGUCGG  UUUUUA UG A
  ||||||||||  |||||| || U
  UUCUCCAGCC  AAAAAU Ac u
AG          --      A  a 


Annotation confidence Medium
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Genome context
JH137844.1: 1130881-1130927 [-]

Database links

Mature stu-miR7991b-5p

Accession MIMAT0030866
Description Solanum tuberosum stu-miR7991b-5p mature miRNA
Sequence 1 - AGGAGGUCGGAAUUUUUAAUGAAU - 24
Evidence experimental
Illumina [1]

Mature stu-miR7991b-3p

Accession MIMAT0058191
Description Solanum tuberosum stu-miR7991b-3p mature miRNA
Sequence 28 - AAUAAAAACCGACCUCUUGA - 47
Evidence experimental
unknown

References

  1. PubMed ID: 23437348
    Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
    Zhang R, Marshall D, Bryan GJ, Hornyik C
    PLoS One (2013) 8:e57233