Stem-loop stu-MIR7992

Accession

MI0025777

Description

Solanum tuberosum stu-MIR7992 precursor miRNA

Literature search

2 open access papers mention stu-MIR7992
(8 sentences)

Sequence

UUUGACAAUGCACAUCUAGACACUuaacuugguuuaaguuggccucauaaacacccaaauuugagaaugcacauccagaaaaguguguuuacggggccaacuuaaaccaaauuauggUGUCUAGAUGUGCAUUUCAAAGU
(((((.(((((((((((((((((((((.((((((((((((((((((.(((((((.....((((.((.......)))))).....))))))).)))))))))))))))))).))).)))))))))))))))))))))))..

Structure

--     C                  -   c                  a       ccaaa    a  au 
  UUUGA AAUGCACAUCUAGACACU uaa uugguuuaaguuggccuc uaaacac     uuug ga  g
  ||||| |||||||||||||||||| ||| |||||||||||||||||| |||||||     |||| ||  c
  AAACU UUACGUGUAGAUCUGUgg auu aaccaaauucaaccgggg auuugug     agac cu  a
UG     -                  u   a                  c       ugaaa    -  ac 

Annotation confidence Not enough data

Genome context

JH137824.1: 720823-720962 [-]

Mature stu-miR7992-5p

• Accession: MIMAT0030868
• Description: Solanum tuberosum stu-miR7992-5p mature miRNA
• Sequence: 1 - UUUGACAAUGCACAUCUAGACACU - 24
• Evidence: experimental ; Illumina [1]

Mature stu-miR7992-3p

• Accession: MIMAT0031186
• Description: Solanum tuberosum stu-miR7992-3p mature miRNA
• Sequence: 118 - UGUCUAGAUGUGCAUUUCAAAGU - 140
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233