Stem-loop stu-MIR7993b

Accession

MI0025785

Description

Solanum tuberosum stu-MIR7993b precursor miRNA

Sequence

776 reads, 25.0 reads per million, 69 experiments

uuAAGUUAACCACAUAAAAUAUGUuuaguuucuuuaguuauaugcagucaccucaauaagcuguaaaauccuagacauuaaagaugaggcauauacuuaaaguagacgauAUAUUUUAUGUGGUUAACUUAACu
(((((((((((((((((((((((((..((((((((((.(((((((..(((.((.......(((........))).......)).))).))))))).)))))).)))))))))))))))))))))))))))))..

Structure

--                         ua    -      u       ag   c  caauaag   uaa 
  uuAAGUUAACCACAUAAAAUAUGUu  guuu cuuuag uauaugc  uca cu       cug   a
  |||||||||||||||||||||||||  |||| |||||| |||||||  ||| ||       |||    
  AAUUCAAUUGGUGUAUUUUAUAuag  caga gaaauu auauacg  agu ga       gau   a
uC                         --    u      c       -g   a  aauuaca   ccu 

Annotation confidence Medium

Genome context

JH137990.1: 439579-439712 [+]

Mature stu-miR7993b-5p

• Accession: MIMAT0031187
• Description: Solanum tuberosum stu-miR7993b-5p mature miRNA
• Sequence: 3 - AAGUUAACCACAUAAAAUAUGU - 24
• Evidence: experimental ; Illumina [1]

Mature stu-miR7993b-3p

• Accession: MIMAT0030876
• Description: Solanum tuberosum stu-miR7993b-3p mature miRNA
• Sequence: 111 - AUAUUUUAUGUGGUUAACUUAAC - 133
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233