Stem-loop stu-MIR7996a

Accession

MI0025791

Description

Solanum tuberosum stu-MIR7996a precursor miRNA

Sequence

AUGUGGUACAUAUGAAAUUUGAAAuuaaucaauuuuuuaguuuguuuuuauauauuuuaaguugcuaauuauuuguauuuagaguauguuuuacguaaauauauuagaaaucacaauaauuaacaaguuaauauaaaaaaaaacuuauaaaaaauucauugacuuuugaaauuucauuuguaucacauaa
((((((((((.(((((((((.((((((((.(((((((((((((.(((((((((....(((.(((.((((((((.((((((..(((((((((.....)))))))))..)))).)))))))))).))).)))))))))))).)))))...)))))))).)))))..))).))))))))).))))))))))..

Structure

--          U         G   --     c        ---     g         auuu   g   c        u  -    ag         u 
  AUGUGGUACA AUGAAAUUU AAA  uuaau aauuuuuu   aguuu uuuuuauau    uaa uug uaauuauu gu auuu  aguauguuu a
  |||||||||| ||||||||| |||  ||||| ||||||||   ||||| |||||||||    ||| ||| |||||||| || ||||  ||||||||| c
  uacacuaugu uacuuuaaa uuu  aguua uuaaaaaa   ucaaa aaaaauaua    auu aac auuaauaa ca uaaa  uuauauaaa g
aa          u         g   uc     c        uau     a         ----   g   a        -  c    ga         u 

Annotation confidence Not enough data

Genome context

JH137859.1: 227652-227841 [+]

Mature stu-miR7996a

• Accession: MIMAT0030882
• Description: Solanum tuberosum stu-miR7996a mature miRNA
• Sequence: 1 - AUGUGGUACAUAUGAAAUUUGAAA - 24
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233