Stem-loop stu-MIR8002

Accession

MI0025801

Description

Solanum tuberosum stu-MIR8002 precursor miRNA

Sequence

147 reads, 7.0 reads per million, 48 experiments

UUUUUCGUGAUAAUAAUGGAAUcaugauauguuagaguuguuguugauuucaacguaaauaaacuaaauaugAUUCCAUUAUUAUCAAGAAAAAAG
((((((.(((((((((((((((((((....(((...(((..(((((....)))))..))).)))....))))))))))))))))))).))))))..

Structure

--      G                   auau   aga   gu     a 
  UUUUUC UGAUAAUAAUGGAAUcaug    guu   guu  uguug u
  |||||| |||||||||||||||||||    |||   |||  |||||  
  AAAAAG ACUAUUAUUACCUUAguau    caa   uaa  gcaac u
GA      A                   aaau   --a   au     u 

Annotation confidence Medium

Genome context

JH137874.1: 704336-704431 [-]

Mature stu-miR8002-5p

• Accession: MIMAT0030892
• Description: Solanum tuberosum stu-miR8002-5p mature miRNA
• Sequence: 1 - UUUUUCGUGAUAAUAAUGGAAU - 22
• Evidence: experimental ; Illumina [1]

Mature stu-miR8002-3p

• Accession: MIMAT0031190
• Description: Solanum tuberosum stu-miR8002-3p mature miRNA
• Sequence: 73 - AUUCCAUUAUUAUCAAGAAAAAAG - 96
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233