Stem-loop stu-MIR8015

Accession

MI0025821

Description

Solanum tuberosum stu-MIR8015 precursor miRNA

Sequence

573 reads, 22.0 reads per million, 61 experiments

UAUUGGAUAUUGAAAAUGAAACUUUaguuaucgagauauucaaacuaaaGUUUCAUUUUCAAGGUCCAAUAGC
((((((((.((((((((((((((((((((...((.....)).)))))))))))))))))))).))))))))..

Structure

--        A                    auc  g 
  UAUUGGAU UUGAAAAUGAAACUUUaguu   ga a
  |||||||| ||||||||||||||||||||   || u
  AUAACCUG AACUUUUACUUUGaaaucaa   cu a
CG        G                    --a  u 

Annotation confidence High

Genome context

JH138004.1: 952993-953065 [+]

Mature stu-miR8015-5p

• Accession: MIMAT0030912
• Description: Solanum tuberosum stu-miR8015-5p mature miRNA
• Sequence: 1 - UAUUGGAUAUUGAAAAUGAAACUUU - 25
• Evidence: experimental ; Illumina [1]

Mature stu-miR8015-3p

• Accession: MIMAT0031198
• Description: Solanum tuberosum stu-miR8015-3p mature miRNA
• Sequence: 50 - GUUUCAUUUUCAAGGUCCAAUAGC - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233