Stem-loop stu-MIR8019

Accession

MI0025825

Description

Solanum tuberosum stu-MIR8019 precursor miRNA

Sequence

21481 reads, 601.0 reads per million, 81 experiments

agggaagcAGGUCAUUCUUUAUGAAACGGAGGgaguauuauaaaauaauacucccuccguuuaaaAAAGAAUGACCUGGUUUGACUUG
...(((.(((((((((((((...((((((((((((((((((...))))))))))))))))))...))))))))))))).)))......

Structure

---agg   g             AUG                  a 
      gaa cAGGUCAUUCUUU   AAACGGAGGgaguauuau  
      ||| |||||||||||||   |||||||||||||||||| a
      UUU GUCCAGUAAGAAA   uuugccucccucauaaua  
GUUCAG   G             aaa                  a 

Annotation confidence Low

Genome context

JH138030.1: 659898-659985 [-]

Mature stu-miR8019-5p

• Accession: MIMAT0031199
• Description: Solanum tuberosum stu-miR8019-5p mature miRNA
• Sequence: 9 - AGGUCAUUCUUUAUGAAACGGAGG - 32
• Evidence: experimental ; Illumina [1]

Mature stu-miR8019-3p

• Accession: MIMAT0030916
• Description: Solanum tuberosum stu-miR8019-3p mature miRNA
• Sequence: 66 - AAAGAAUGACCUGGUUUGACUUG - 88
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233