Stem-loop stu-MIR8001b

Accession

MI0025826

Description

Solanum tuberosum stu-MIR8001b precursor miRNA

Sequence

6368 reads, 117.0 reads per million, 76 experiments

aUGGGGAUUAGUAUGAAAAUUUgcaggaaaauaaguuuccugcggAUUUUCAUACUAAUUCCUAGaa
.(((((((((((((((((((((((((((((.....)))))))))))))))))))))))))))))...

Structure

--a                             a 
   UGGGGAUUAGUAUGAAAAUUUgcaggaaa u
   ||||||||||||||||||||||||||||| a
   AUCCUUAAUCAUACUUUUAggcguccuuu a
aaG                             g 

Annotation confidence Medium

Genome context

JH138045.1: 943713-943779 [-]

Mature stu-miR8001b-5p

• Accession: MIMAT0030917
• Description: Solanum tuberosum stu-miR8001b-5p mature miRNA
• Sequence: 2 - UGGGGAUUAGUAUGAAAAUUU - 22
• Evidence: experimental ; Illumina [1]

Mature stu-miR8001b-3p

• Accession: MIMAT0031200
• Description: Solanum tuberosum stu-miR8001b-3p mature miRNA
• Sequence: 46 - AUUUUCAUACUAAUUCCUAG - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233