Stem-loop stu-MIR8023

Accession

MI0025831

Description

Solanum tuberosum stu-MIR8023 precursor miRNA

Sequence

4861 reads, 177.0 reads per million, 82 experiments

UUGCCAAUGAAAUAAUGCCAAAAAaaaaaaaaacucauuacauuagauagucaaagguaaugauuuugucucuuuuuggacugccaaauguacugauuuucugucuuuUUUGGCACAAUUUCAUUGGCAACC
(((((((((((((..((((((((((.....(((.(((.((((((.(.((((((((((..((......))..)))))..))))).).)))))).))).))).....))))))))))..)))))))))))))..

Structure

--             AA          aaaaa   c   u      a a     --     ua  ga 
  UUGCCAAUGAAAU  UGCCAAAAAa     aaa uca uacauu g uaguc  aaagg  au  u
  |||||||||||||  ||||||||||     ||| ||| |||||| | |||||  |||||  ||   
  AACGGUUACUUUA  ACGGUUUuuu     uuu agu auguaa c gucag  uuuuc  ug  u
CC             AC          cuguc   u   c      a c     gu     uc  uu 

Annotation confidence High

Genome context

JH138103.1: 311626-311757 [+]

Mature stu-miR8023-5p

• Accession: MIMAT0058216
• Description: Solanum tuberosum stu-miR8023-5p mature miRNA
• Sequence: 1 - UUGCCAAUGAAAUAAUGCCAAAAA - 24
• Evidence: experimental ; unknown

Mature stu-miR8023-3p

• Accession: MIMAT0030922
• Description: Solanum tuberosum stu-miR8023-3p mature miRNA
• Sequence: 109 - UUUGGCACAAUUUCAUUGGCAACC - 132
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233