Stem-loop stu-MIR8024a

Accession

MI0025832

Description

Solanum tuberosum stu-MIR8024a precursor miRNA

Sequence

4446 reads, 111.0 reads per million, 80 experiments

uugaagaauuuaaagacuucaacuugcAUACUUGGAGGAUUUGAAGACgucaucuugcauacuuggaggauuugaagacuuaaacuugcauauUUGGAGGAUUUGAAGAUUUCAACU
((((((..((((((..((((((..((((......(((..((((((..(.(((...........))).)..))))))..))).....))))...))))))..))))))..))))))..

Structure

--      aa      ga      -cu    UACUUG   GA      GA g   ucuu 
  uugaag  uuuaaa  cuucaa   ugcA      GAG  UUUGAA  C uca    g
  ||||||  ||||||  ||||||   ||||      |||  ||||||  | |||    c
  AACUUU  AAGUUU  GAGGUU   acgu      uuc  aaguuu  g ggu    a
UC      AG      AG      uau    -ucaaa   ag      ag a   ucau 

Annotation confidence Low

Genome context

JH137805.1: 1984844-1984960 [-]

Mature stu-miR8024a-5p

• Accession: MIMAT0031201
• Description: Solanum tuberosum stu-miR8024a-5p mature miRNA
• Sequence: 28 - AUACUUGGAGGAUUUGAAGAC - 48
• Evidence: experimental ; Illumina [1]

Mature stu-miR8024a-3p

• Accession: MIMAT0030923
• Description: Solanum tuberosum stu-miR8024a-3p mature miRNA
• Sequence: 94 - UUGGAGGAUUUGAAGAUUUCAACU - 117
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233