Stem-loop stu-MIR8024b

Accession

MI0025833

Description

Solanum tuberosum stu-MIR8024b precursor miRNA

Sequence

2558 reads, 67.0 reads per million, 78 experiments

uuggaggauuuAAAGACUUCAACUUGCAUACUUGGaagauuugaagacuucagcuugcauacUUGGAGGAUUUGAAGAUUUCAACU
((((((..((((((..((((((..((((..((..((((.........))))))..))))...))))))..))))))..))))))..

Structure

--      ga      GA      -CU    UA  UG    auu 
  uuggag  uuuAAA  CUUCAA   UGCA  CU  Gaag   u
  ||||||  ||||||  ||||||   ||||  ||  ||||   g
  AACUUU  AAGUUU  GAGGUU   acgu  ga  cuuc   a
UC      AG      AG      cau    uc  --    aga 

Annotation confidence Low

Genome context

JH138287.1: 266682-266767 [+]

Mature stu-miR8024b-5p

• Accession: MIMAT0058217
• Description: Solanum tuberosum stu-miR8024b-5p mature miRNA
• Sequence: 12 - AAAGACUUCAACUUGCAUACUUGG - 35
• Evidence: experimental ; unknown

Mature stu-miR8024b-3p

• Accession: MIMAT0030924
• Description: Solanum tuberosum stu-miR8024b-3p mature miRNA
• Sequence: 63 - UUGGAGGAUUUGAAGAUUUCAACU - 86
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233