Stem-loop stu-MIR1886i

Accession

MI0025834

Description

Solanum tuberosum stu-MIR1886i precursor miRNA

Literature search

1 open access papers mention stu-MIR1886i
(1 sentences)

Sequence

444 reads, 14.0 reads per million, 68 experiments

auGAGAUGAAAUUAGCGUUUGGAuaugcgAUUUUACGUUGAUUUCAUCUCAUGa
(((((((((((((((((((((......)))....))))))))))))))))))..

Structure

--                  ----   GA 
  auGAGAUGAAAUUAGCGU    UUG  u
  ||||||||||||||||||    |||   
  UACUCUACUUUAGUUGCA    Agc  a
aG                  UUUU   gu 

Annotation confidence Medium

Genome context

JH138128.1: 40008-40061 [-]

Mature stu-miR1886i-5p

• Accession: MIMAT0030925
• Description: Solanum tuberosum stu-miR1886i-5p mature miRNA
• Sequence: 3 - GAGAUGAAAUUAGCGUUUGGA - 23
• Evidence: experimental ; Illumina [1]

Mature stu-miR1886i-3p

• Accession: MIMAT0031202
• Description: Solanum tuberosum stu-miR1886i-3p mature miRNA
• Sequence: 30 - AUUUUACGUUGAUUUCAUCUCAUG - 53
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233