miRBase entry: stu-MIR8026

Stem-loop stu-MIR8026


Accession
MI0025836
Description
Solanum tuberosum stu-MIR8026 precursor miRNA


Sequence

1493 reads, 51.0 reads per million, 74 experiments
AUGUAGAGAAUAUGUGGUAACCCUaaugaguggaggaaggaCCAAUUUAUAGAGGUUAUGACguaaucuaguacgucc
(((((.(((.(((((.(((((((((.(((((((........)).)))))))).)))))).))))).)))..)))))..

Structure
--     -G   A     G      -   a     -  agg 
  AUGUA  AGA UAUGU GUAACC CUa ugagu gg   a
  |||||  ||| ||||| |||||| ||| ||||| ||    
  ugcau  ucu augCA UAUUGG GAU AUUUA CC   a
cc     ga   a     G      A   -     A  agg 


Annotation confidence Low
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Genome context
JH138175.1: 376696-376773 [+]

Database links

Mature stu-miR8026-5p

Accession MIMAT0030927
Description Solanum tuberosum stu-miR8026-5p mature miRNA
Sequence 1 - AUGUAGAGAAUAUGUGGUAACCCU - 24
Evidence experimental
Illumina [1]

Mature stu-miR8026-3p

Accession MIMAT0058218
Description Solanum tuberosum stu-miR8026-3p mature miRNA
Sequence 42 - CCAAUUUAUAGAGGUUAUGAC - 62
Evidence experimental
unknown

References

  1. PubMed ID: 23437348
    Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
    Zhang R, Marshall D, Bryan GJ, Hornyik C
    PLoS One (2013) 8:e57233