Stem-loop stu-MIR8030

Accession

MI0025843

Description

Solanum tuberosum stu-MIR8030 precursor miRNA

Sequence

1309 reads, 44.0 reads per million, 78 experiments

uuGGGUUGGUUUGGUCUCGGguugauuuuuuuuaauuAAAACCAAAUCAACCCAAau
(((((((((((((((....((((((......))))))...)))))))))))))))..

Structure

--               CUCG      uu 
  uuGGGUUGGUUUGGU    Gguuga  u
  |||||||||||||||    ||||||   
  AACCCAACUAAACCA    uuaauu  u
ua               -AAA      uu 

Annotation confidence Low

Genome context

JH138037.1: 540458-540514 [+]

Mature stu-miR8030-5p

• Accession: MIMAT0030934
• Description: Solanum tuberosum stu-miR8030-5p mature miRNA
• Sequence: 3 - GGGUUGGUUUGGUCUCGG - 20
• Evidence: experimental ; Illumina [1]

Mature stu-miR8030-3p

• Accession: MIMAT0031207
• Description: Solanum tuberosum stu-miR8030-3p mature miRNA
• Sequence: 38 - AAAACCAAAUCAACCCAA - 55
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233