miRBase entry: stu-MIR8032a

Stem-loop stu-MIR8032a


Accession
MI0025845
Description
Solanum tuberosum stu-MIR8032a precursor miRNA


Sequence

5295 reads, 129.0 reads per million, 77 experiments
UGGUCGGCAUGACUCCCGAGGUUuucaguGUGAGUCGGUGUGAUUAGG
((((((...((((((.((..(....)..)).))))))...))))))..

Structure
--      GCA      C  AG U 
  UGGUCG   UGACUC CG  G U
  ||||||   |||||| ||  |  
  AUUAGU   GCUGAG Gu  c u
GG      GUG      U  ga u 


Annotation confidence Medium
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Genome context
JH137817.1: 1226288-1226335 [+]

Database links

Mature stu-miR8032a-5p

Accession MIMAT0030936
Description Solanum tuberosum stu-miR8032a-5p mature miRNA
Sequence 1 - UGGUCGGCAUGACUCCCGAGGUU - 23
Evidence experimental
Illumina [1]

Mature stu-miR8032a-3p

Accession MIMAT0031208
Description Solanum tuberosum stu-miR8032a-3p mature miRNA
Sequence 30 - GUGAGUCGGUGUGAUUAGG - 48
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23437348
    Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
    Zhang R, Marshall D, Bryan GJ, Hornyik C
    PLoS One (2013) 8:e57233