Stem-loop stu-MIR8032c

Accession

MI0025847

Description

Solanum tuberosum stu-MIR8032c precursor miRNA

Literature search

1 open access papers mention stu-MIR8032c
(2 sentences)

Sequence

2238 reads, 65.0 reads per million, 68 experiments

UGGUCGGCAUGACUCCCGAGGUuuucaaUGUGAGUCUGUGCGAUUAGg
((((((.((((((((.((..(....)..)).))))).)))))))))..

Structure

--      G   -     C  AG U 
  UGGUCG CAU GACUC CG  G u
  |||||| ||| ||||| ||  |  
  AUUAGC GUG CUGAG GU  c u
gG      -   U     U  aa u 

Annotation confidence High

Genome context

JH138081.1: 745494-745541 [+]

Mature stu-miR8032c-5p

• Accession: MIMAT0030938
• Description: Solanum tuberosum stu-miR8032c-5p mature miRNA
• Sequence: 1 - UGGUCGGCAUGACUCCCGAGGU - 22
• Evidence: experimental ; Illumina [1]

Mature stu-miR8032c-3p

• Accession: MIMAT0058220
• Description: Solanum tuberosum stu-miR8032c-3p mature miRNA
• Sequence: 29 - UGUGAGUCUGUGCGAUUAG - 47
• Evidence: experimental ; unknown

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233