Stem-loop stu-MIR8038a

Accession

MI0025857

Description

Solanum tuberosum stu-MIR8038a precursor miRNA

Literature search

2 open access papers mention stu-MIR8038a
(4 sentences)

Sequence

CCUUGUGAGUAAGUUGAAUCUCaugcuuguuaaacuucaacacguguugcagaaugcgucccaacuuaacaagcaugaGUUCAACUUGCUCACUUGGAG
((..((((((((((((((.((((((((((((((........(((((((....)))))))......))))))))))))))))))))))))))))..))..

Structure

--  UU              U              acuucaac       g 
  CC  GUGAGUAAGUUGAA CUCaugcuuguuaa        acguguu c
  ||  |||||||||||||| ||||||||||||||        |||||||  
  GG  CACUCGUUCAACUU Gaguacgaacaauu        ugcguaa a
GA  UU              -              --caaccc       g 

Annotation confidence Not enough data

Genome context

JH138051.1: 882831-882929 [+]

Mature stu-miR8038a-5p

• Accession: MIMAT0030948
• Description: Solanum tuberosum stu-miR8038a-5p mature miRNA
• Sequence: 1 - CCUUGUGAGUAAGUUGAAUCUC - 22
• Evidence: experimental ; Illumina [1]

Mature stu-miR8038a-3p

• Accession: MIMAT0031216
• Description: Solanum tuberosum stu-miR8038a-3p mature miRNA
• Sequence: 79 - GUUCAACUUGCUCACUUGGAG - 99
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233