Stem-loop stu-MIR8040

Accession

MI0025862

Description

Solanum tuberosum stu-MIR8040 precursor miRNA

Sequence

UCAUAAUUACAAUUAUAAGCCucauuuuuuuuuucugccucaaaaaaaauaaaugaggCUUAUAAUUGUAAUUAUGAUC
(((((((((((((((((((((((((((.((((((.((...)).)))))).)))))))))))))))))))))))))))..

Structure

--                           u      c  c 
  UCAUAAUUACAAUUAUAAGCCucauuu uuuuuu ug  
  ||||||||||||||||||||||||||| |||||| || c
  AGUAUUAAUGUUAAUAUUCggaguaaa aaaaaa ac  
CU                           u      a  u 

Annotation confidence Not enough data

Genome context

JH137872.1: 1628935-1629013 [+]

Mature stu-miR8040-5p

• Accession: MIMAT0031220
• Description: Solanum tuberosum stu-miR8040-5p mature miRNA
• Sequence: 1 - UCAUAAUUACAAUUAUAAGCC - 21
• Evidence: experimental ; Illumina [1]

Mature stu-miR8040-3p

• Accession: MIMAT0030953
• Description: Solanum tuberosum stu-miR8040-3p mature miRNA
• Sequence: 59 - CUUAUAAUUGUAAUUAUGAUC - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233