Stem-loop stu-MIR8041a

Accession

MI0025863

Description

Solanum tuberosum stu-MIR8041a precursor miRNA

Sequence

2803 reads, 88.0 reads per million, 79 experiments

gugcuUUGCUAUUUUCAUUGACUUCAAaauauugugauauugagaauucAAUGAUGUAUAGCAAAGAGCCU
((.(((((((((..(((((((.(((..(((((....)))))..))).)))))))...))))))))).))..

Structure

--  g         -UU       C   AA     u 
  gu cuUUGCUAU   UCAUUGA UUC  aauau g
  || |||||||||   ||||||| |||  |||||  
  CG GAAACGAUA   AGUAAcu aag  uuaua u
UC  A         UGU       u   ag     g 

Annotation confidence Low

Genome context

JH137872.1: 167537-167607 [-]

Mature stu-miR8041a-5p

• Accession: MIMAT0031221
• Description: Solanum tuberosum stu-miR8041a-5p mature miRNA
• Sequence: 6 - UUGCUAUUUUCAUUGACUUCAA - 27
• Evidence: experimental ; Illumina [1]

Mature stu-miR8041a-3p

• Accession: MIMAT0030954
• Description: Solanum tuberosum stu-miR8041a-3p mature miRNA
• Sequence: 50 - AAUGAUGUAUAGCAAAGAGCCU - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233