Stem-loop stu-MIR8043

Accession

MI0025866

Description

Solanum tuberosum stu-MIR8043 precursor miRNA

Sequence

1748 reads, 40.0 reads per million, 67 experiments

CCAAAGUCCGAUUAUAUCAACUuuuacuuuuuuucuuuuuagaauaaauaaguggaaauuauccauuucccacuuauuuauucuaaaaagaaaaaaguaaaaguUGAUAUAAUUGGACUUUGGCC
(((((((((((((((((((((((((((((((((.(((((((((((((((((((((((((.....)))).))))))))))))))))))))))))))))))))))))))))))))))))))))))..

Structure

--                                 u                     -    u 
  CCAAAGUCCGAUUAUAUCAACUuuuacuuuuuu cuuuuuagaauaaauaagugg aaau a
  ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| u
  GGUUUCAGGUUAAUAUAGUugaaaaugaaaaaa gaaaaaucuuauuuauucacc uuua c
CC                                 -                     c    c 

Annotation confidence High

Genome context

JH137885.1: 556154-556278 [+]

Mature stu-miR8043-5p

• Accession: MIMAT0058224
• Description: Solanum tuberosum stu-miR8043-5p mature miRNA
• Sequence: 1 - CCAAAGUCCGAUUAUAUCAACU - 22
• Evidence: experimental ; unknown

Mature stu-miR8043-3p

• Accession: MIMAT0030957
• Description: Solanum tuberosum stu-miR8043-3p mature miRNA
• Sequence: 105 - UGAUAUAAUUGGACUUUGGCC - 125
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233