Stem-loop stu-MIR6149

Accession

MI0025872

Description

Solanum tuberosum stu-MIR6149 precursor miRNA

Literature search

2 open access papers mention stu-MIR6149
(3 sentences)

Sequence

UUGCAACACACCUGAAUCGUCaaauauuuuuuaauauauauuuguUGAUUCAGGUUUGUAUGCAAAC
((((((((.((((((((((.(((((((..........))))))).)))))))))).))).)))))..

Structure

--     -   C          U       uuuu 
  UUGCA ACA ACCUGAAUCG Caaauau    u
  ||||| ||| |||||||||| |||||||     
  AACGU UGU UGGACUUAGU guuuaua    a
CA     A   U          u       uaua 

Annotation confidence Not enough data

Genome context

JH137942.1: 10809-10875 [-]

Mature stu-miR6149-5p

• Accession: MIMAT0030963
• Description: Solanum tuberosum stu-miR6149-5p mature miRNA
• Sequence: 1 - UUGCAACACACCUGAAUCGUC - 21
• Evidence: experimental ; Illumina [1]

Mature stu-miR6149-3p

• Accession: MIMAT0031226
• Description: Solanum tuberosum stu-miR6149-3p mature miRNA
• Sequence: 46 - UGAUUCAGGUUUGUAUGCAAAC - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233