Stem-loop stu-MIR164

Accession

MI0025882

Description

Solanum tuberosum stu-MIR164 precursor miRNA

Literature search

7 open access papers mention stu-MIR164
(47 sentences)

Sequence

UGGAGAAGCAGGGCACAUGCUgaauuacuugaaacuuugauuauucaagaauuuugCAUGUGCUCUAGCUCUCCAGC
((((((.(((((((((((((.(((((.((((((..........))))))))))).))))))))))).))))))))..

Structure

--      A  -           U     a      acuu 
  UGGAGA GC AGGGCACAUGC gaauu cuugaa    u
  |||||| || ||||||||||| ||||| ||||||     
  ACCUCU CG UCUCGUGUACg uuuaa gaacuu    g
CG      -  A           u     -      auua 

Annotation confidence Not enough data

Genome context

JH138033.1: 603264-603340 [+]

Mature stu-miR164-5p

• Accession: MIMAT0031235
• Description: Solanum tuberosum stu-miR164-5p mature miRNA
• Sequence: 1 - UGGAGAAGCAGGGCACAUGCU - 21
• Evidence: experimental ; Illumina [1]

Mature stu-miR164-3p

• Accession: MIMAT0030973
• Description: Solanum tuberosum stu-miR164-3p mature miRNA
• Sequence: 57 - CAUGUGCUCUAGCUCUCCAGC - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233