Stem-loop stu-MIR171b

Accession

MI0025931

Description

Solanum tuberosum stu-MIR171b precursor miRNA

Literature search

6 open access papers mention stu-MIR171b
(31 sentences)

Sequence

AGAUAUUGAUGUGGCUCAAUCugaagacauggcuaaauauguaauuagccaugugauuuuggaUUGAGCCGCGUCAAUAUCUCU
((((((((((((((((((((((((((((((((((((........))))))))))..))))))))))))))))))))))))))..

Structure

--                          --          aua 
  AGAUAUUGAUGUGGCUCAAUCugaag  acauggcuaa   u
  ||||||||||||||||||||||||||  ||||||||||    
  UCUAUAACUGCGCCGAGUUagguuuu  uguaccgauu   g
UC                          ag          aau 

Annotation confidence Not enough data

Genome context

JH138432.1: 116543-116626 [+]

Mature stu-miR171b-5p

• Accession: MIMAT0031247
• Description: Solanum tuberosum stu-miR171b-5p mature miRNA
• Sequence: 1 - AGAUAUUGAUGUGGCUCAAUC - 21
• Evidence: experimental ; Illumina [1]

Mature stu-miR171b-3p

• Accession: MIMAT0031248
• Description: Solanum tuberosum stu-miR171b-3p mature miRNA
• Sequence: 64 - UUGAGCCGCGUCAAUAUCUCU - 84
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233