Stem-loop stu-MIR171c

Accession

MI0025937

Description

Solanum tuberosum stu-MIR171c precursor miRNA

Literature search

6 open access papers mention stu-MIR171c
(31 sentences)

Sequence

UAUUGGCCUGGUUCACUCAGAcacacacuauuuugcuuUGAUUGAGCCGUGUCAAUAUC
(((((((.(((((((.(((((((..........)).))))).))))))).)))))))..

Structure

--       C       C     -  caca 
  UAUUGGC UGGUUCA UCAGA ca    c
  ||||||| ||||||| ||||| ||     
  AUAACUG GCCGAGU AGUuu gu    u
CU       U       U     c  uuua 

Annotation confidence Not enough data

Genome context

JH138511.1: 106309-106367 [-]

Mature stu-miR171c-5p

• Accession: MIMAT0031258
• Description: Solanum tuberosum stu-miR171c-5p mature miRNA
• Sequence: 1 - UAUUGGCCUGGUUCACUCAGA - 21
• Evidence: experimental ; Illumina [1]

Mature stu-miR171c-3p

• Accession: MIMAT0031259
• Description: Solanum tuberosum stu-miR171c-3p mature miRNA
• Sequence: 39 - UGAUUGAGCCGUGUCAAUAUC - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233