Stem-loop stu-MIR156b

Accession

MI0025963

Description

Solanum tuberosum stu-MIR156b precursor miRNA

Gene family

MIPF0000008; MIR156

Literature search

9 open access papers mention stu-MIR156b
(22 sentences)

Sequence

UUGACAGAAGAUAGAGAGCACaaaugauuaagugcaugaaaauuguaugcaccuuacuccuuugugcucuuuauucuucugucacca
.(((((((((((((((((((((((.((.((((((((((.......)))))).)))).)).))))))))))))).))))))))))...

Structure

--U          -             u  u    -      aa 
   UGACAGAAGA UAGAGAGCACaaa ga uaag ugcaug  a
   |||||||||| ||||||||||||| || |||| ||||||  a
   acugucuucu auuucucguguuu cu auuc acguau  u
acc          u             c  c    c      gu 

Annotation confidence Not enough data

Genome context

JH137878.1: 425005-425091 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from stu-MIR156b

Mature stu-miR156b

• Accession: MIMAT0031297
• Description: Solanum tuberosum stu-miR156b mature miRNA
• Sequence: 1 - UUGACAGAAGAUAGAGAGCAC - 21
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233