Stem-loop stu-MIR156e

Accession

MI0025990

Description

Solanum tuberosum stu-MIR156e precursor miRNA

Literature search

9 open access papers mention stu-MIR156e
(23 sentences)

Sequence

141212 reads, 3929.0 reads per million, 81 experiments

UGACAGAAGAGAGUGAGCACacaugguucuuucauggauuauuccccauguuuaaaagcucugcguGCUCACGCUCUAUCUGUCACA
(((((((((((.((((((((.((.((((....(((((........)))))......)))).)).)))))))).)))).)))))))..

Structure

--       -    A        a  u    --cuuu     auu 
  UGACAGA AGAG GUGAGCAC ca gguu      caugg   a
  ||||||| |||| |||||||| || ||||      |||||    
  ACUGUCU UCUC CACUCGug gu ucga      guacc   u
AC       A    G        c  c    aaauuu     ccu 

Annotation confidence High

Genome context

JH137825.1: 159113-159199 [+]

Mature stu-miR156e-5p

• Accession: MIMAT0031346
• Description: Solanum tuberosum stu-miR156e-5p mature miRNA
• Sequence: 1 - UGACAGAAGAGAGUGAGCAC - 20
• Evidence: experimental ; Illumina [1]

Mature stu-miR156e-3p

• Accession: MIMAT0058246
• Description: Solanum tuberosum stu-miR156e-3p mature miRNA
• Sequence: 67 - GCUCACGCUCUAUCUGUCACA - 87
• Evidence: experimental ; unknown

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233