Stem-loop osa-MIR531c

Accession

MI0026010

Description

Oryza sativa osa-MIR531c precursor miRNA

Literature search

8 open access papers mention osa-MIR531c
(11 sentences)

Sequence

130797 reads, 582.0 reads per million, 112 experiments

ggcgccgccgagccuugCUCGCCGGGGCUGCGUGCCGCCAuagcUGGCGCGCAUCCCCGUCGAGCguugcucgacggugcc
(((((((.(((((..((((((.(((((.((((((((((....)).)))))))).))))).))))))..))))).)))))))

Structure

       c     cu      C     C        -  C 
ggcgccg cgagc  ugCUCG CGGGG UGCGUGCC GC A
||||||| |||||  |||||| ||||| |||||||| ||  
ccguggc gcucg  gCGAGC GCCCC ACGCGCGG cg u
       a     uu      U     U        U  a 

Annotation confidence Low

Genome context

11: 26930675-26930755 [+]

Mature osa-miR531c-5p

• Accession: MIMAT0031379
• Description: Oryza sativa osa-miR531c-5p mature miRNA
• Sequence: 18 - CUCGCCGGGGCUGCGUGCCGCCA - 40
• Evidence: experimental ; Northern [1]

Mature osa-miR531c-3p

• Accession: MIMAT0056331
• Description: Oryza sativa osa-miR531c-3p mature miRNA
• Sequence: 45 - UGGCGCGCAUCCCCGUCGAGC - 65
• Evidence: experimental ; unknown

References

1. PubMed ID: 16126864
   Loss of function of OsDCL1 affects microRNA accumulation and causes developmental defects in rice
   "Liu B, Li P, Li X, Liu C, Cao S, Chu C, Cao X"
   "Plant Physiol (2005) 139:296-305