miRBase entry: mmu-mir-3473f

Stem-loop mmu-mir-3473f


Accession
MI0026016
Symbol
MGI: Mir3473f
Description
Mus musculus mmu-mir-3473f precursor miRNA

Literature search
4 open access papers mention mmu-mir-3473f
(72 sentences)

Sequence

50228 reads, 19042 reads per million, 142 experiments
ucugcuagagcagcauaugccccaaccacugagccaucucuccagccccuuuguuguuuucaauacauaaaauaagCAAAUAGGACUGGAGAGAUGgcucagcgguuaagagcacugacugcucuuccagaggucu
((((..(((((((((..((((..((((.(((((((((((((((((((..(((((((((((........))))).))))))..)).))))))))))))))))).))))..).))).)).)))))))..)))).....

Structure
-----    cu       -  ua   - cc    a                 -  cc      -     caa 
     ucug  agagcag ca  ugc c  aacc cugagccaucucuccag cc  uuuguu guuuu   u
     ||||  ||||||| ||  ||| |  |||| ||||||||||||||||| ||  |||||| |||||    
     agac  ucucguc gu  acg g  uugg gacucgGUAGAGAGGUC GG  AAACga uaaaa   a
ucugg    cu       a  -c   a aa    c                 A  AU      a     uac 


Annotation confidence Low
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Genome context
chr1: 106546496-106546631 [-]

Database links

Mature mmu-miR-3473f

Accession MIMAT0031390
Description Mus musculus mmu-miR-3473f mature miRNA
Sequence 77 - CAAAUAGGACUGGAGAGAUG - 96
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23185045
    Profiling of T helper cell-derived small RNAs reveals unique antisense transcripts and differential association of miRNAs with argonaute proteins 1 and 2
    "Polikepahad S, Corry DB"
    "Nucleic Acids Res (2013) 41:1164-1177