Stem-loop mmu-mir-3473f

Accession

MI0026016

Symbol

MGI: Mir3473f

Description

Mus musculus mmu-mir-3473f precursor miRNA

Literature search

5 open access papers mention mmu-mir-3473f
(74 sentences)

Sequence

7975 reads, 32.0 reads per million, 140 experiments

ucugcuagagcagcauaugccccaaccaCUGAGCCAUCUCUCCAGCCCCuuuguuguuuucaauacauaaaauaagcaaauaggaCUGGAGAGAUGGCUCAGCgguuaagagcacugacugcucuuccagaggucu
((((..(((((((((..((((..((((.(((((((((((((((((((..(((((((((((........))))).))))))..)).))))))))))))))))).))))..).))).)).)))))))..)))).....

Structure

-----    cu       -  ua   - cc    a                 -  CC      -     caa 
     ucug  agagcag ca  ugc c  aacc CUGAGCCAUCUCUCCAG CC  uuuguu guuuu   u
     ||||  ||||||| ||  ||| |  |||| ||||||||||||||||| ||  |||||| |||||    
     agac  ucucguc gu  acg g  uugg GACUCGGUAGAGAGGUC gg  aaacga uaaaa   a
ucugg    cu       a  -c   a aa    C                 a  au      a     uac 

Annotation confidence Medium

Genome context

1: 106474226-106474361 [-]

Mature mmu-miR-3473f-5p

• Accession: MIMAT0050746
• Description: Mus musculus mmu-miR-3473f-5p mature miRNA
• Sequence: 29 - CUGAGCCAUCUCUCCAGCCCC - 49
• Evidence: experimental ; Illumina [1]

Mature mmu-miR-3473f-3p

• Accession: MIMAT0031390
• Description: Mus musculus mmu-miR-3473f-3p mature miRNA
• Sequence: 86 - CUGGAGAGAUGGCUCAGC - 103
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23185045
   Profiling of T helper cell-derived small RNAs reveals unique antisense transcripts and differential association of miRNAs with argonaute proteins 1 and 2
   "Polikepahad S, Corry DB"
   "Nucleic Acids Res (2013) 41:1164-1177