Stem-loop mmu-mir-8090

Accession

MI0026017

Symbol

MGI: Mir8090

Description

Mus musculus mmu-mir-8090 precursor miRNA

Literature search

1 open access papers mention mmu-mir-8090
(1 sentences)

Sequence

332 reads, 6.0 reads per million, 37 experiments

guagcucagaguuuuaaguuucacccaucguacagggaaguccaggccuccgcacugggcuccugaugugcagucaGAAGCGCAGUGGAGGUCUGUguacugcccacgucucuuccugcuuuuauauagucuguga
....(.((((.(...((((.........(((...(((.(((((((((((((..((((.(((.(((((.....))))).))).))))))))))))).).))).)))))).........))))......).)))).).

Structure

guag u    g ---uuu    uucacccau   aca   a   - -         gc    g   c     g 
    c caga u      aagu         cgu   ggg agu c caggccucc  acug gcu cugau u
    | |||| |      ||||         |||   ||| ||| | |||||||||  |||| ||| ||||| g
    g gucu a      uucg         gca   ccc uca g GUCUGGAGG  UGAC CGA Gacug c
---a u    g uauauu    uccuucucu   ---   g   u U         --    G   A     a 

Annotation confidence Not enough data

Genome context

19: 47743461-47743596 [-]

Mature mmu-miR-8090-3p

• Accession: MIMAT0031391
• Description: Mus musculus mmu-miR-8090-3p mature miRNA
• Sequence: 77 - GAAGCGCAGUGGAGGUCUGU - 96
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23185045
   Profiling of T helper cell-derived small RNAs reveals unique antisense transcripts and differential association of miRNAs with argonaute proteins 1 and 2
   "Polikepahad S, Corry DB"
   "Nucleic Acids Res (2013) 41:1164-1177