Stem-loop mmu-mir-8094

Accession

MI0026021

Symbol

MGI: Mir8094

Description

Mus musculus mmu-mir-8094 precursor miRNA

Sequence

1208 reads, 5 reads per million, 63 experiments

cacggguugcagcaguacuacgugaAACUGAAGGACAACGAGAAGAaccggaagcucuuugaucuucucgauguccucgaguucaaccaggucaguaucgagggucuguguaggcga
....(.(((((.(((.(((.(.(((.(((((((((((.((((((((..((((.....)))).)))))))).))))))..............))))).))).)))))))))))).)..

Structure

cacg g     g   u   a g   A     --------------      A        ac    a 
    g uugca cag acu c uga ACUGA              AGGACA CGAGAAGA  cgga g
    | ||||| ||| ||| | ||| |||||              |||||| ||||||||  |||| c
    c gaugu guc ugg g gcu ugacu              uccugu gcucuucu  guuu u
--ag g     -   -   - a   a     ggaccaacuugagc      a        -a    c 

Annotation confidence Low

Genome context

chr17: 35251289-35251405 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mmu-mir-8094

References

1. PubMed ID: 23185045
   Profiling of T helper cell-derived small RNAs reveals unique antisense transcripts and differential association of miRNAs with argonaute proteins 1 and 2
   "Polikepahad S, Corry DB"
   "Nucleic Acids Res (2013) 41:1164-1177