Stem-loop mmu-mir-8098

Accession

MI0026026

Symbol

MGI: Mir8098

Description

Mus musculus mmu-mir-8098 precursor miRNA

Sequence

294 reads, 2.0 reads per million, 64 experiments

gccggcuugcggcuaguguggcggcgguguugguuuuggaagccaGAGCGGGCACAUUCCCUGGACAGgcggcaggGCUAUGGUCGCUGGCUCCCAAaggcccgcuccgcuucgcagcccgauccugagcgcaagcc
...(((((((((((.(((.(((((.((((..((((((((.(((((..((((.((....(((((.........)))))...)).))))))))).))))).)))))))))))).)))))))...........)))))))

Structure

gcc       -----------    a   u     c    uu   -     a     GA    G  CAUU     GAC 
   ggcuugc           ggcu gug ggcgg ggug  ggu uuugg agcca  GCGG CA    CCCUG   A
   |||||||           |||| ||| ||||| ||||  ||| ||||| |||||  |||| ||    |||||   G
   ccgaacg           ccga cgc ucgcc ucgc  ccg aAACC UCGGU  CGCU GU    Gggac   g
---       cgaguccuagc    -   u     -    --   g     C     --    G  -AUC     ggc 

Annotation confidence Not enough data

Genome context

14: 63075170-63075306 [+]

Mature mmu-miR-8098-5p

• Accession: MIMAT0050751
• Description: Mus musculus mmu-miR-8098-5p mature miRNA
• Sequence: 46 - GAGCGGGCACAUUCCCUGGACAG - 68
• Evidence: experimental ; Illumina [1]

Mature mmu-miR-8098-3p

• Accession: MIMAT0031400
• Description: Mus musculus mmu-miR-8098-3p mature miRNA
• Sequence: 77 - GCUAUGGUCGCUGGCUCCCAA - 97
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23185045
   Profiling of T helper cell-derived small RNAs reveals unique antisense transcripts and differential association of miRNAs with argonaute proteins 1 and 2
   "Polikepahad S, Corry DB"
   "Nucleic Acids Res (2013) 41:1164-1177