Stem-loop mmu-mir-8098

Accession

MI0026026

Symbol

MGI: Mir8098

Description

Mus musculus mmu-mir-8098 precursor miRNA

Sequence

179 reads, 1 reads per million, 49 experiments

gccggcuugcggcuaguguggcggcgguguugguuuuggaagccagagcgggcacauucccuggacaggcggcaggGCUAUGGUCGCUGGCUCCCAAaggcccgcuccgcuucgcagcccgauccugagcgcaagcc
...(((((((((((.(((.(((((.((((..((((((((.(((((..((((.((....(((((.........)))))...)).))))))))).))))).)))))))))))).)))))))...........)))))))

Structure

gcc       -----------    a   u     c    uu   -     a     ga    g  cauu     gac 
   ggcuugc           ggcu gug ggcgg ggug  ggu uuugg agcca  gcgg ca    cccug   a
   |||||||           |||| ||| ||||| ||||  ||| ||||| |||||  |||| ||    |||||   g
   ccgaacg           ccga cgc ucgcc ucgc  ccg aAACC UCGGU  CGCU GU    Gggac   g
---       cgaguccuagc    -   u     -    --   g     C     --    G  -AUC     ggc 

Annotation confidence Low

Genome context

chr14: 62837721-62837857 [+]

References

1. PubMed ID: 23185045
   Profiling of T helper cell-derived small RNAs reveals unique antisense transcripts and differential association of miRNAs with argonaute proteins 1 and 2
   "Polikepahad S, Corry DB"
   "Nucleic Acids Res (2013) 41:1164-1177