Stem-loop mmu-mir-142b

Accession

MI0026028

Symbol

MGI: Mir142b

Description

Mus musculus mmu-mir-142b precursor miRNA

Literature search

169 open access papers mention mmu-mir-142b
(1915 sentences)

Sequence

2477 reads, 53.0 reads per million, 51 experiments

gcguggucuccgaagcccacagugcacucaucCAUAAAGUAGGAAACACUACacccuccagugcuguuaguAGUGCUUUCUACUUUAUGggugacugcacugucugucuguccac
..((((.(.....((...((((((((.((((((((((((((((((.((((((.................)))))).)))))))))))))))))).))))))))))....).))))

Structure

gc    u uccga  ccc        c                  A      acccucc 
  gugg c     ag   acagugca ucaucCAUAAAGUAGGAA CACUAC       a
  |||| |     ||   |||||||| |||||||||||||||||| ||||||       g
  cacc g     uc   ugucacgu aguggGUAUUUCAUCUUU GUGAug       u
--    u -ucug  ---        c                  C      auugucg 

Annotation confidence Medium

Genome context

11: 87647667-87647781 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mmu-mir-142b

Mature mmu-miR-142b-5p

• Accession: MIMAT0031402
• Description: Mus musculus mmu-miR-142b-5p mature miRNA
• Sequence: 33 - CAUAAAGUAGGAAACACUAC - 52
• Evidence: experimental ; Illumina [1]

Mature mmu-miR-142b-3p

• Accession: MIMAT0050753
• Description: Mus musculus mmu-miR-142b-3p mature miRNA
• Sequence: 72 - AGUGCUUUCUACUUUAUG - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23185045
   Profiling of T helper cell-derived small RNAs reveals unique antisense transcripts and differential association of miRNAs with argonaute proteins 1 and 2
   "Polikepahad S, Corry DB"
   "Nucleic Acids Res (2013) 41:1164-1177