Stem-loop mmu-mir-142b

Accession

MI0026028

Symbol

MGI: Mir142b

Description

Mus musculus mmu-mir-142b precursor miRNA

Literature search

166 open access papers mention mmu-mir-142b
(2029 sentences)

Sequence

1954265 reads, 2 reads per million, 102 experiments

gcguggucuccgaagcccacagugcacucaUCCAUAAAGUAGGAAACACUacacccuccagugcuguuaguagugcuuucuacuuuaugggugacugcacugucugucuguccac
..((((.(.....((...((((((((.((((((((((((((((((.((((((.................)))))).)))))))))))))))))).))))))))))....).))))

Structure

gc    u uccga  ccc        c                  A      acccucc 
  gugg c     ag   acagugca ucaUCCAUAAAGUAGGAA CACUac       a
  |||| |     ||   |||||||| |||||||||||||||||| ||||||       g
  cacc g     uc   ugucacgu aguggguauuucaucuuu gugaug       u
--    u -ucug  ---        c                  c      auugucg 

Annotation confidence Not enough data

Genome context

chr11: 87756841-87756955 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mmu-mir-142b

Mature mmu-miR-142b

• Accession: MIMAT0031402
• Description: Mus musculus mmu-miR-142b mature miRNA
• Sequence: 31 - UCCAUAAAGUAGGAAACACU - 50
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23185045
   Profiling of T helper cell-derived small RNAs reveals unique antisense transcripts and differential association of miRNAs with argonaute proteins 1 and 2
   "Polikepahad S, Corry DB"
   "Nucleic Acids Res (2013) 41:1164-1177