Stem-loop mmu-mir-8100

Accession

MI0026029

Symbol

MGI: Mir8100

Description

Mus musculus mmu-mir-8100 precursor miRNA

Sequence

95 reads, 17 reads per million, 36 experiments

gccagcaaguaaacaaugacugucccaggaAGGAGGAAAGGGAGCAAGCAGGUgugaccuucuccgcccgccccuuccuuuccccccucugggucuggagcacugggaacuuacuuggcuu
(((((.((((...((.((.((.(((((((..((.((((((((((...((.((((.((.....)))))).))..))))))))))))..))))))...).)))).))...)))).).))))..

Structure

--    - c    aaa  a  a  g ---      aA  A          CAA  A    u  c 
  gcca g aagu   ca ug cu u   cccagg  GG GGAAAGGGAG   GC GGUg ga c
  |||| | ||||   || || || |   ||||||  || ||||||||||   || |||| || u
  cggu c uuca   gu ac ga g   gggucu  cc ccuuuccuuc   cg ccgc cu u
uu    u a    agg  c  -  g ucu      cc  -          -cc  c    -  c 

Annotation confidence Not enough data

Genome context

chr11: 46102270-46102390 [+]

Mature mmu-miR-8100

• Accession: MIMAT0031403
• Description: Mus musculus mmu-miR-8100 mature miRNA
• Sequence: 31 - AGGAGGAAAGGGAGCAAGCAGGU - 53
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23185045
   Profiling of T helper cell-derived small RNAs reveals unique antisense transcripts and differential association of miRNAs with argonaute proteins 1 and 2
   "Polikepahad S, Corry DB"
   "Nucleic Acids Res (2013) 41:1164-1177