Stem-loop mmu-mir-497b

Accession

MI0026030

Symbol

MGI: Mir497b

Description

Mus musculus mmu-mir-497b precursor miRNA

Literature search

45 open access papers mention mmu-mir-497b
(621 sentences)

Sequence

535 reads, 8.0 reads per million, 92 experiments

ucaucggugccucccauacccucgcucuaaCACCACAGUGUGGUUUGGACGUGGccacagugccguACAAACCACAGUGUGCUGCUGGggcgggggcaggacuggggugggucgagaggaagaca
((.((((..(((((((..(((((((((((.((.((((.(((((((((.(((..((....))..))).))))))))).)))).)).)))))))))))......))))).)).))))))........

Structure

--------  a    ug  -     ----ua           a  C    G         G   UG  c 
        uc ucgg  cc uccca      cccucgcucua CA CACA UGUGGUUUG ACG  Gc a
        || ||||  || |||||      ||||||||||| || |||| ||||||||| |||  ||  
        ag agcu  gg ggggu      gggggcggGGU GU GUGU ACACCAAAC ugc  ug c
acagaagg  -    -g  u     caggac           C  C    G         A   cg  a 

Annotation confidence Medium

Genome context

11: 70125518-70125642 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from mmu-mir-497b

Mature mmu-miR-497b-5p

• Accession: MIMAT0031404
• Description: Mus musculus mmu-miR-497b-5p mature miRNA
• Sequence: 31 - CACCACAGUGUGGUUUGGACGUGG - 54
• Evidence: experimental ; Illumina [1]

Mature mmu-miR-497b-3p

• Accession: MIMAT0050754
• Description: Mus musculus mmu-miR-497b-3p mature miRNA
• Sequence: 67 - ACAAACCACAGUGUGCUGCUGG - 88
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23185045
   Profiling of T helper cell-derived small RNAs reveals unique antisense transcripts and differential association of miRNAs with argonaute proteins 1 and 2
   "Polikepahad S, Corry DB"
   "Nucleic Acids Res (2013) 41:1164-1177