miRBase entry: ath-MIR8121

Stem-loop ath-MIR8121


Accession
MI0026055
Description
Arabidopsis thaliana ath-MIR8121 precursor miRNA


Sequence

6562 reads, 46.0 reads per million, 174 experiments
auaaauccuuAAAGUAUAAUGGUUUAGUGGUUUGaguuguccuacuaauuguucaagguaacgaguucgaucaacagaccuuaaaaauuaguuaaauguaaguaaaucaaacuauuacAUCAUUAUAGUUUUUAGGUAAAU
......(((.(((.(((((((((.(((((((((((........(((((((....(((((...((......)).....)))))...)))))))..............))))))))))).))))))))).)))..))).....

Structure
auaaau   -u   G         U           ------guuguccu       guuc     --aac  gu 
      ccu  AAA UAUAAUGGU UAGUGGUUUGa              acuaauu    aaggu     ga  u
      |||  ||| ||||||||| |||||||||||              |||||||    |||||     ||   
      GGA  UUU AUAUUACUA auuaucaaacu              ugauuaa    uucca     cu  c
-UAAAU   UU   G         c           aaaugaauguaaau       -aaa     gacaa  ag 


Annotation confidence Not enough data
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Genome context
chr2: 16587970-16588110 [-]

Database links

Mature ath-miR8121-5p

Accession MIMAT0032262
Description Arabidopsis thaliana ath-miR8121-5p mature miRNA
Sequence 11 - AAAGUAUAAUGGUUUAGUGGUUUG - 34
Evidence experimental
Illumina [1]

Mature ath-miR8121-3p

Accession MIMAT0053978
Description Arabidopsis thaliana ath-miR8121-3p mature miRNA
Sequence 119 - AUCAUUAUAGUUUUUAGGUAAAU - 141
Evidence experimental
unknown

References

  1. PubMed ID: 23709668
    Comprehensive investigation of microRNAs enhanced by analysis of sequence variants, expression patterns, ARGONAUTE loading, and target cleavage
    "Jeong DH, Thatcher SR, Brown RS, Zhai J, Park S, Rymarquis LA, Meyers BC, Green PJ"
    "Plant Physiol (2013) 162:1225-1245