Stem-loop ppe-MIR156b

Accession

MI0026057

Description

Prunus persica ppe-MIR156b precursor miRNA

Literature search

14 open access papers mention ppe-MIR156b
(61 sentences)

Sequence

1969474 reads, 55863.0 reads per million, 14 experiments

uguUGACAGAAGAAAGAGAGCACaacccgccauuggccaaagagaucuucgccacuguugggaguguGCUCUCUCUUCUUCUGUCAUCa
((.(((((((((((((((((((((.((((.((.((((..(((....))).)))).)).))))..)))))))))).))))))))))).))

Structure

  u           -          -a    c  u    ca   a 
ug UGACAGAAGAA AGAGAGCACa  cccg ca uggc  aag g
|| ||||||||||| ||||||||||  |||| || ||||  |||  
aC ACUGUCUUCUU UCUCUCGugu  gggu gu accg  uuc a
  U           C          ga    u  c    -c   u 

Annotation confidence High

Genome context

chrG6: 1928560-1928648 [-]

Mature ppe-miR156b-5p

• Accession: MIMAT0031429
• Description: Prunus persica ppe-miR156b-5p mature miRNA
• Sequence: 4 - UGACAGAAGAAAGAGAGCAC - 23
• Evidence: experimental ; Illumina [1]

Mature ppe-miR156b-3p

• Accession: MIMAT0058497
• Description: Prunus persica ppe-miR156b-3p mature miRNA
• Sequence: 68 - GCUCUCUCUUCUUCUGUCAUC - 88
• Evidence: experimental ; unknown

References

1. PubMed ID: 22909020
   Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs
   Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z
   BMC Plant Biol (2012) 12:149