Stem-loop ppe-MIR156e

Accession

MI0026060

Description

Prunus persica ppe-MIR156e precursor miRNA

Literature search

14 open access papers mention ppe-MIR156e
(61 sentences)

Sequence

46786 reads, 709.0 reads per million, 20 experiments

uUGACAGAAGAGAGUGAGCACacagaggcacuuggcauaaagcguaugcuauugcuuuugcguGCUCAUGUCUCUUUCUGUCAG
.((((((((((((((((((((.((((((((..(((((((.....))))))).)))))))).)))))))).)))).)))))))).

Structure

u        -    -        a        cu       a 
 UGACAGAA GAGA GUGAGCAC cagaggca  uggcaua a
 |||||||| |||| |||||||| ||||||||  ||||||| g
 ACUGUCUU CUCU UACUCGug guuuucgu  aucguau c
G        U    G        c        -u       g 

Annotation confidence High

Genome context

chrG1: 34960231-34960314 [+]

Mature ppe-miR156e-5p

• Accession: MIMAT0031432
• Description: Prunus persica ppe-miR156e-5p mature miRNA
• Sequence: 2 - UGACAGAAGAGAGUGAGCAC - 21
• Evidence: experimental ; Illumina [1]

Mature ppe-miR156e-3p

• Accession: MIMAT0058500
• Description: Prunus persica ppe-miR156e-3p mature miRNA
• Sequence: 64 - GCUCAUGUCUCUUUCUGUCAG - 84
• Evidence: experimental ; unknown

References

1. PubMed ID: 22909020
   Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs
   Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z
   BMC Plant Biol (2012) 12:149