Stem-loop ppe-MIR156i

Accession

MI0026064

Description

Prunus persica ppe-MIR156i precursor miRNA

Literature search

14 open access papers mention ppe-MIR156i
(61 sentences)

Sequence

346479 reads, 6494.0 reads per million, 20 experiments

auguuguggUUGACAGAAGAUAGAGAGCACaaaugaacauauacacccagucacccagacccaggaaaaugauugUGUAUGAUCAGUUUUGUGCUCUcuuuucuucugccaacauauuauau
(((.((((.(((.(((((((.(((((((((((((((.((((((((..((....((........))....))..)))))))).)))..))))))))))))..))))))).))))))).)))..

Structure

--   u    g   A       -U            --   a        cc  guca  cag 
  aug ugug UUG CAGAAGA  AGAGAGCACaaa  uga cauauaca  ca    cc   a
  ||| |||| ||| |||||||  ||||||||||||  ||| ||||||||  ||    ||    
  uau auac aac gucuucu  ucUCUCGUGUUU  ACU GUAUGUgu  gu    gg   c
ua   u    -   c       uu            UG   A        ua  aaaa  acc 

Annotation confidence Medium

Genome context

chrG3: 26355154-26355275 [-]

Mature ppe-miR156i-5p

• Accession: MIMAT0031436
• Description: Prunus persica ppe-miR156i-5p mature miRNA
• Sequence: 10 - UUGACAGAAGAUAGAGAGCAC - 30
• Evidence: experimental ; Illumina [1]

Mature ppe-miR156i-3p

• Accession: MIMAT0058504
• Description: Prunus persica ppe-miR156i-3p mature miRNA
• Sequence: 76 - UGUAUGAUCAGUUUUGUGCUCU - 97
• Evidence: experimental ; unknown

References

1. PubMed ID: 22909020
   Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs
   Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z
   BMC Plant Biol (2012) 12:149