Stem-loop ppe-MIR164c

Accession

MI0026071

Description

Prunus persica ppe-MIR164c precursor miRNA

Literature search

6 open access papers mention ppe-MIR164c
(20 sentences)

Sequence

gggugaguagcucuuguUGGAGAAGCAGGGCACGUGCAaguucuagcucaaaugcuucugcaugggagcuuaagcuaagcuuauagcaaaacuuugcacgugcuccccuucuccaacacaaguuucucaccu
(((((((.((((..(((((((((((..(((((((((((((((..(((((..((((....))))..)))))..))))..(((...))).......)))))))))))..)))))))))))..)))).)))))))

Structure

       u    cu           CA           ------------------    cu     aa    u 
gggugag agcu  uguUGGAGAAG  GGGCACGUGCA                  aguu  agcuc  augc u
||||||| ||||  |||||||||||  |||||||||||                  ||||  |||||  ||||  
uccacuc uuga  acaaccucuuc  cucgugcacgu                  ucga  ucgag  uacg c
       u    ac           cc           uucaaaacgauauucgaa    au     gg    u 

Annotation confidence Not enough data

Genome context

chrG6: 28330451-28330582 [+]

Mature ppe-miR164c

• Accession: MIMAT0031443
• Description: Prunus persica ppe-miR164c mature miRNA
• Sequence: 18 - UGGAGAAGCAGGGCACGUGCA - 38
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22909020
   Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs
   Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z
   BMC Plant Biol (2012) 12:149