Stem-loop ppe-MIR166a

Accession

MI0026073

Description

Prunus persica ppe-MIR166a precursor miRNA

Literature search

8 open access papers mention ppe-MIR166a
(40 sentences)

Sequence

11910847 reads, 233551.0 reads per million, 20 experiments

guugaggGGAAUGCUGUCUGGUUCGAGAccauuccuuugaagcaagaaacaugaucauccgaaugaucUCGGACCAGGCUUCAUUCCCCccaac
((((.((((((((..(((((((((((((.(((((...(((..............)))...))))).)))))))))))))..)))))))).))))

Structure

    a        CU             c     cuu   agcaag 
guug ggGGAAUG  GUCUGGUUCGAGA cauuc   uga      a
|||| ||||||||  ||||||||||||| |||||   |||       
caac CCCCUUAC  CGGACCAGGCUcu guaag   acu      a
    c        UU             a     ccu   aguaca 

Annotation confidence High

Genome context

chrG1: 2213018-2213111 [-]

Mature ppe-miR166a-5p

• Accession: MIMAT0058513
• Description: Prunus persica ppe-miR166a-5p mature miRNA
• Sequence: 8 - GGAAUGCUGUCUGGUUCGAGA - 28
• Evidence: experimental ; unknown

Mature ppe-miR166a-3p

• Accession: MIMAT0031445
• Description: Prunus persica ppe-miR166a-3p mature miRNA
• Sequence: 69 - UCGGACCAGGCUUCAUUCCCC - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22909020
   Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs
   Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z
   BMC Plant Biol (2012) 12:149