Stem-loop ppe-MIR166b

Accession

MI0026074

Description

Prunus persica ppe-MIR166b precursor miRNA

Literature search

7 open access papers mention ppe-MIR166b
(36 sentences)

Sequence

30453528 reads, 536631.0 reads per million, 20 experiments

aguugaggGGAAUGUCGUCUGGUUCGAGAuccuucacaaccguggagcuuaagcauagucugaaugauuUCGGACCAGGCUUCAUUCCCCucaacu
((((((((((((((..(((((((((((((((.((((..((.(((.........))).)).)))).)))))))))))))))..))))))))))))))

Structure

              UC               c    ca  c   gag 
aguugaggGGAAUG  GUCUGGUUCGAGAuc uuca  ac gug   c
||||||||||||||  ||||||||||||||| ||||  || |||   u
ucaacuCCCCUUAC  CGGACCAGGCUuuag aagu  ug uac   u
              UU               u    -c  a   gaa 

Annotation confidence High

Genome context

chrG8: 20544987-20545082 [+]

Mature ppe-miR166b-5p

• Accession: MIMAT0058514
• Description: Prunus persica ppe-miR166b-5p mature miRNA
• Sequence: 9 - GGAAUGUCGUCUGGUUCGAGA - 29
• Evidence: experimental ; unknown

Mature ppe-miR166b-3p

• Accession: MIMAT0031446
• Description: Prunus persica ppe-miR166b-3p mature miRNA
• Sequence: 70 - UCGGACCAGGCUUCAUUCCCC - 90
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22909020
   Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs
   Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z
   BMC Plant Biol (2012) 12:149