Stem-loop ppe-MIR167d

Accession

MI0026081

Description

Prunus persica ppe-MIR167d precursor miRNA

Literature search

10 open access papers mention ppe-MIR167d
(25 sentences)

Sequence

273475 reads, 21417.0 reads per million, 20 experiments

ucaugcauuuguagcaguUGAAGCUGCCAGCAUGAUCUUAaccucccuauuuugguuagggaagaucAGAUCAUGUGGCAGUUUCACCuguuauugguagcauga
(((((((((.(((((((.(((((((((((.((((((((...(.((((((.......)))))).)...))))))))))))))))))).))))))).))).))))))

Structure

      -   u       u           G        UAa c      uu 
ucaugc auu guagcag UGAAGCUGCCA CAUGAUCU   c ucccua  u
|||||| ||| ||||||| ||||||||||| ||||||||   | ||||||  u
aguacg ugg uauuguC ACUUUGACGGU GUACUAGA   g agggau  g
      a   u       C           -        cua a      ug 

Annotation confidence High

Genome context

chrG1: 1563673-1563777 [+]

Mature ppe-miR167d-5p

• Accession: MIMAT0031453
• Description: Prunus persica ppe-miR167d-5p mature miRNA
• Sequence: 19 - UGAAGCUGCCAGCAUGAUCUUA - 40
• Evidence: experimental ; Illumina [1]

Mature ppe-miR167d-3p

• Accession: MIMAT0058521
• Description: Prunus persica ppe-miR167d-3p mature miRNA
• Sequence: 68 - AGAUCAUGUGGCAGUUUCACC - 88
• Evidence: experimental ; unknown

References

1. PubMed ID: 22909020
   Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs
   Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z
   BMC Plant Biol (2012) 12:149