Stem-loop ppe-MIR393b

Accession

MI0026101

Description

Prunus persica ppe-MIR393b precursor miRNA

Literature search

8 open access papers mention ppe-MIR393b
(23 sentences)

Sequence

30786 reads, 1079.0 reads per million, 20 experiments

gguggaggcuUCCAAAGGGAUCGCAUUGAUCuaauuaaccaaaucaacauggugaguguagauauuugauauuggaUCGAUGCGAUCCCUUGGGAAGuuucuauc
(((((((((((((.(((((((((((((((((((((.......(((.((((.....)))).))).......))))))))))))))))))))).)))))))))))))

Structure

             A                     uaaccaa   a    g 
gguggaggcuUCC AAGGGAUCGCAUUGAUCuaau       auc acau g
||||||||||||| |||||||||||||||||||||       ||| |||| u
cuaucuuuGAAGG UUCCCUAGCGUAGCUagguua       uag ugug g
             G                     uaguuua   a    a 

Annotation confidence High

Genome context

chrG2: 28654018-28654122 [-]

Mature ppe-miR393b-5p

• Accession: MIMAT0031475
• Description: Prunus persica ppe-miR393b-5p mature miRNA
• Sequence: 11 - UCCAAAGGGAUCGCAUUGAUC - 31
• Evidence: experimental ; Illumina [1]

Mature ppe-miR393b-3p

• Accession: MIMAT0058536
• Description: Prunus persica ppe-miR393b-3p mature miRNA
• Sequence: 77 - UCGAUGCGAUCCCUUGGGAAG - 97
• Evidence: experimental ; unknown

References

1. PubMed ID: 22909020
   Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs
   Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z
   BMC Plant Biol (2012) 12:149