Stem-loop ppe-MIR399j

Accession

MI0026130

Description

Prunus persica ppe-MIR399j precursor miRNA

Literature search

4 open access papers mention ppe-MIR399j
(5 sentences)

Sequence

ucaaauaagcaaagcagucauagggcuccucuuucuuggcaggcacuggugacugaugcagcuacaaaugcacaaucacuuucauugaccUGCCAAAGAAGAGUUGCCCUAcgauugcuuuggcuuaauga
.....((((((((((((((.((((((..((((((.((((((((((..(((((.((.((((........)))))).))))).....)).)))))))).))))))..)))))).))))))))).)))))....

Structure

ucaaa     -         a      uc      c        -  ---cu     c  a    gcu 
     uaagc aaagcaguc uagggc  cucuuu uuggcagg ca     gguga ug ugca   a
     ||||| ||||||||| ||||||  |||||| |||||||| ||     ||||| || ||||    
     auucg uuucguuag AUCCCG  GAGAAG AACCGUcc gu     ucacu ac acgu   c
-agua     g         c      UU      A        a  uacuu     a  -    aaa 

Annotation confidence Not enough data

Genome context

chrG3: 1558106-1558236 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from ppe-MIR399j

Mature ppe-miR399j

• Accession: MIMAT0031506
• Description: Prunus persica ppe-miR399j mature miRNA
• Sequence: 91 - UGCCAAAGAAGAGUUGCCCUA - 111
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22909020
   Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs
   Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z
   BMC Plant Biol (2012) 12:149