Stem-loop ppe-MIR827

Accession

MI0026140

Description

Prunus persica ppe-MIR827 precursor miRNA

Literature search

3 open access papers mention ppe-MIR827
(4 sentences)

Sequence

13595 reads, 2524.0 reads per million, 20 experiments

ugUUUGUUUAUGGUCAUCUACUUAuucugcuucaguauuuuuguacaauuaauauaugacauaaugaUUAGAUGACCAUCAACAAACA
((((((((.(((((((((((.(((((.((..((((((((..(.....)..))))).))))).))))).))))))))))).))))))))

Structure

        U           C     c  cu   -     uu g 
ugUUUGUU AUGGUCAUCUA UUAuu ug  uca guauu  u u
|||||||| ||||||||||| ||||| ||  ||| |||||  | a
ACAAACAA UACCAGUAGAU aguaa ac  agu uauaa  a c
        C           U     u  --   a     uu a 

Annotation confidence High

Genome context

chrG7: 22179391-22179478 [-]

Mature ppe-miR827-5p

• Accession: MIMAT0058566
• Description: Prunus persica ppe-miR827-5p mature miRNA
• Sequence: 3 - UUUGUUUAUGGUCAUCUACUUA - 24
• Evidence: experimental ; unknown

Mature ppe-miR827-3p

• Accession: MIMAT0031516
• Description: Prunus persica ppe-miR827-3p mature miRNA
• Sequence: 68 - UUAGAUGACCAUCAACAAACA - 88
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22909020
   Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs
   Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z
   BMC Plant Biol (2012) 12:149