Stem-loop ppe-MIR2111d

Accession

MI0026144

Description

Prunus persica ppe-MIR2111d precursor miRNA

Sequence

4968 reads, 149.0 reads per million, 10 experiments

gguuaggaucgggUAAUCUGCAUCCUGAGGUUUAgaucagcacauauacuuguuguaucugGUCCUUGGGGUGCGGAUUACCUcguccucacc
(((.(((((.((((((((((((((((((((.(((((((((((........))))).)))))).)))))))))))))))))))).))))).)))

Structure

   u     c                    U      -     cau 
ggu aggau gggUAAUCUGCAUCCUGAGG UUAgau cagca   a
||| ||||| |||||||||||||||||||| |||||| |||||    
cca uccug UCCAUUAGGCGUGGGGUUCC Ggucua guugu   u
   c     c                    U      u     uca 

Annotation confidence High

Genome context

chrG6: 25321069-25321161 [-]

Mature ppe-miR2111d-5p

• Accession: MIMAT0031520
• Description: Prunus persica ppe-miR2111d-5p mature miRNA
• Sequence: 14 - UAAUCUGCAUCCUGAGGUUUA - 34
• Evidence: experimental ; Illumina [1]

Mature ppe-miR2111d-3p

• Accession: MIMAT0058567
• Description: Prunus persica ppe-miR2111d-3p mature miRNA
• Sequence: 62 - GUCCUUGGGGUGCGGAUUACCU - 83
• Evidence: experimental ; unknown

References

1. PubMed ID: 22909020
   Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs
   Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z
   BMC Plant Biol (2012) 12:149