miRBase entry: ppe-MIR8124

Stem-loop ppe-MIR8124


Accession
MI0026150
Description
Prunus persica ppe-MIR8124 precursor miRNA


Sequence

240 reads, 23.0 reads per million, 12 experiments
caauugucUCAAAACUUGGUAUCUUGGUGccggugugcauggcuuagcagcagcaaagcggcuagcccaucauagcauguuuccacuggcaccaaugauACCAAGUUUUGAGACGAUUG
((((((((((((((((((((((((((((((((((((((((((.(((((.((......)).))))).))))....)))......)))))))))))).)))))))))))))))))))))))

Structure
                       -            ------   ----    c     a  ag 
caauugucUCAAAACUUGGUAUC UUGGUGccggug      ugc    augg uuagc gc  c
||||||||||||||||||||||| ||||||||||||      |||    |||| ||||| ||   
GUUAGCAGAGUUUUGAACCAuag aaccacggucac      acg    uacc gaucg cg  a
                       u            cuuugu   auac    c     g  aa 


Annotation confidence Low
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Genome context
chrG7: 18399778-18399896 [-]

Database links

Mature ppe-miR8124-5p

Accession MIMAT0031531
Description Prunus persica ppe-miR8124-5p mature miRNA
Sequence 9 - UCAAAACUUGGUAUCUUGGUG - 29
Evidence experimental
Illumina [1]

Mature ppe-miR8124-3p

Accession MIMAT0031532
Description Prunus persica ppe-miR8124-3p mature miRNA
Sequence 100 - ACCAAGUUUUGAGACGAUUG - 119
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22909020
    Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs
    Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z
    BMC Plant Biol (2012) 12:149